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International Journal of Bioinformatics and Biological Science
Year : 2013, Volume : 1, Issue : 1
First page : ( 109) Last page : ( 128)
Print ISSN : 2319-5169.

Graph transforms for modeling chemical reaction pathways

Yegnarayanan V.1, Wadhwa Gulshan2,*

1Senior Member IEEE & Senior Professor, Department of Mathematics, Velammal Engineering College, Chennai-600 066

2Joint Director, Department of Bio-Technology, Ministry of Science and Technology, New Delhi-110 003.

*Corresponding Author: Gulshan Wadhwa, Email: gulshan.dbt@nic.in

Online published on 25 April, 2013.

Abstract

In this paper we discuss some general graph-theoretic formalism analogous to the chemical concepts of reactions and kits of reaction rules. We believe that this mathematical formalism may lead to improvements in Computer-assisted Organic Synthesis. Further we indicate that hypergraphs and its structure can be used to model the chemical reaction network.

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Keywords

Graphs, Chemical Reaction Network, Metadigraphs, Hypergraphs, Stochastic Graph Transformation.

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